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ABSTRACT Nitrogenase iron (Fe) proteins reduce CO 2 to CO and/or hydrocarbons under ambient conditions. Here, we report a 2.4-Å crystal structure of the Fe protein from Methanosarcina acetivorans ( Ma NifH), which is generated in the presence of a reductant, dithionite, and an alternative CO 2 source, bicarbonate. Structural analysis of this methanogen Fe protein species suggests that CO 2 is possibly captured in an unactivated, linear conformation near the [Fe 4 S 4 ] cluster of Ma NifH by a conserved arginine (Arg) pair in a concerted and, possibly, asymmetric manner. Density functional theory calculations and mutational analyses provide further support for the capture of CO 2 on Ma NifH while suggesting a possible role of Arg in the initial coordination of CO 2 via hydrogen bonding and electrostatic interactions. These results provide a useful framework for further mechanistic investigations of CO 2 activation by a surface-exposed [Fe 4 S 4 ] cluster, which may facilitate future development of FeS catalysts for ambient conversion of CO 2 into valuable chemical commodities. IMPORTANCE This work reports the crystal structure of a previously uncharacterized Fe protein from a methanogenic organism, which provides important insights into the structural properties of the less-characterized, yet highly interesting archaeal nitrogenase enzymes. Moreover, the structure-derived implications for CO 2 capture by a surface-exposed [Fe 4 S 4 ] cluster point to the possibility of developing novel strategies for CO 2 sequestration while providing the initial insights into the unique mechanism of FeS-based CO 2 activation. 

Abstract Binding and activation of CO by nitrogenase is a topic of interest because CO is isoelectronic to N₂, the physiological substrate of this enzyme. The catalytic relevance of one‐ and multi‐CO‐bound states (the lo‐CO and hi‐CO states) of V‐nitrogenase to C−C coupling and N₂reduction was examined. Enzymatic and spectroscopic studies demonstrate that the multiple CO moieties in the hi‐CO state cannot be coupled as they are, suggesting that C−C coupling requires further activation and/or reduction of the bound CO entity. Moreover, these studies reveal an interesting correlation between decreased activity of N₂reduction and increased population of the lo‐CO state, pointing to the catalytic relevance of the belt Fe atoms that are bridged by the single CO moiety in the lo‐CO state. Together, these results provide a useful framework for gaining insights into the nitrogenase‐catalyzed reaction via further exploration of the utility of the lo‐CO conformation of V‐nitrogenase.